DNA Binding Motif

						

			
Accessions: HOXB13_EOMES_2 (HumanTF2 1.0)

			
Names: HOXB13_EOMES
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 17
Consensus: cymrTwAawtmaCAccy
Weblogo: 
PSSM: P0      A      C      G      T
01     85    218     99     60      c
02     61    204     34    163      y
03    248    215     31    149      m
04    329     15    133     45      r
05     45     55      3    462      T
06    462     27     33    201      w
07    462     16     10     59      A
08    462     90     30    146      a
09    142     88    113    119      w
10     98    126     56    462      t
11    184    278     87     87      m
12    462     89    173     96      a
13     32    462     30     35      C
14    462     22    140     19      A
15    133    462     77     32      c
16    105    192     56    108      c
17     87    117     46    212      y
Type: Heterodimer
Binding TFs: EOMES_TF2 (T-box)
HOXB13_TF1 / HOXB13_TF2 (Homeobox domain)
HOXB13_Full (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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