DNA Binding Motif

						

			
Accessions: NFIA_HUMAN.H10MO.C|M01362 (HOCOMOCO 10), NFIA_MOUSE.H10MO.C|M01235 (HOCOMOCO 10)

			
Names: NFIA
Organisms: Homo sapiens, Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Nuclear factor 1{7.1.2}; NF-1A (NF-IA){7.1.2.0.1}
Length: 15
Consensus: tTGGCacrgwGCCAr
Weblogo: 
PSSM: P0      A      C      G      T
01     34     50     25    124      t
02      8      7     16    202      T
03     11      2    204     16      G
04     15      7    199     12      G
05     26    168     27     12      C
06     97     58     29     49      a
07     50     76     49     58      c
08     86      0    147      0      r
09     54     51     80     48      g
10     70     30     25    108      w
11     18     16    171     28      G
12     14    189     15     15      C
13     13    195     13     12      C
14    182     15     16     20      A
15    102     21     83     27      r
Type: Heterodimer
Binding TFs: NFIA_HUMAN (CTF/NF-I family transcription modulation region, MH1 domain, Nuclear factor I protein pre-N-terminus)
NFIA_MOUSE (CTF/NF-I family transcription modulation region, MH1 domain, Nuclear factor I protein pre-N-terminus)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.