DNA Binding Motif

						

			
Accessions: MGA_DBD_2 (HumanTF 1.0)

			
Names: MGA
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 18
Consensus: AGGTGTKAhdTmACACCT
Weblogo: 
PSSM: P0      A      C      G      T
01   1210     11    154     59      A
02    194    121   1721    101      G
03      0     13   2043      1      G
04      1    198      2   2022      T
05      1      1   2100      1      G
06     80    201      9   1902      T
07     54     48   1402    556      K
08   1387      2     14      2      A
09    564    495    167    412      h
10    492    203    552    528      d
11      6      2      0   2139      T
12    530    948     18     48      m
13   1379     14     97     43      A
14      0   1515      0      0      C
15   1417      1     90      0      A
16      1   1551     11      1      C
17     26   1319    210    321      C
18    123    323     22   1751      T
Binding TFs: MGA_DBD (T-box)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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