DNA Binding Motif

						

			
Accessions: M0035 (AthalianaCistrome v4_May2016)

			
Names: AT1G28160.ampDAP, T06007;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: cryCkCCGCCGyCr
Weblogo: 
PSSM: P0      A      C      G      T
01    107    324     48    113      c
02    177     50    234    131      r
03     62    306     71    153      y
04     46    465      7     74      C
05     91      4    327    170      k
06     14    447    105     26      C
07     11    581      0      0      C
08     27      0    550     15      G
09      0    592      0      0      C
10      2    590      0      0      C
11      7      0    585      0      G
12      6    381      6    199      y
13     64    428     16     84      C
14    255      0    243     94      r
Binding TFs: T06007 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.