DNA Binding Motif
| Accessions: | MA1998.1 (JASPAR 2024) |
| Names: | Prdm14 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 12 |
| Consensus: | hrGGTCTCTAac |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 3731 3697 2840 3573 h 02 4790 1446 4852 2753 r 03 735 1081 11199 826 G 04 293 571 12447 530 G 05 544 381 1234 11682 T 06 267 12509 562 503 C 07 415 1276 183 11967 T 08 132 12030 891 788 C 09 203 278 128 13232 T 10 12559 505 393 384 A 11 6399 2226 1974 3242 a 12 2088 5729 3232 2792 c |
| Type: | Heterodimer |
| Binding TFs: | E9Q3T6 (Zinc finger, C2H2 type, SET domain, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) E9Q3T6 |
| Binding Sites: | MA1998.1.1 MA1998.1.10 / MA1998.1.16 MA1998.1.11 / MA1998.1.17 MA1998.1.12 / MA1998.1.18 MA1998.1.13 / MA1998.1.19 MA1998.1.14 / MA1998.1.20 MA1998.1.15 MA1998.1.16 MA1998.1.17 MA1998.1.18 MA1998.1.19 MA1998.1.2 MA1998.1.20 MA1998.1.3 / MA1998.1.5 MA1998.1.4 / MA1998.1.6 MA1998.1.5 / MA1998.1.7 MA1998.1.6 / MA1998.1.8 MA1998.1.7 / MA1998.1.9 MA1998.1.13 / MA1998.1.8 MA1998.1.15 / MA1998.1.9 MA1998.1.10 MA1998.1.11 MA1998.1.12 MA1998.1.14 MA1998.1.3 MA1998.1.4 |
| Publications: | Chia NY, Chan YS, Feng B, Lu X, Orlov YL, Moreau D, Kumar P, Yang L, Jiang J, Lau MS, Huss M, Soh BS, Kraus P, Li P, Lufkin T, Lim B, Clarke ND, Bard F, Ng HH. A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity. Nature 468:316-20 (2010). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.