DNA Binding Motif

						

			
Accessions: HOXC11_DBD_2 (HumanTF 1.0)

			
Names: HOXC11
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 11
Consensus: rgymATwAAaw
Weblogo: 
PSSM: P0      A      C      G      T
01   2158    637   1710   1134      r
02   2499   1732   5639    971      g
03    197   2878    105   2761      y
04   5639   3554    699    911      m
05   5639    558    848    356      A
06    442      0      0   5639      T
07   3953     72    113   1686      w
08   5639     84     64    461      A
09   5639    344     92    282      A
10   5639   1080    769   1486      a
11   2052   1299    831   1457      w
Binding TFs: HOXC11_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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