DNA Binding Motif

						

			
Accessions: M0376 (AthalianaCistrome v4_May2016)

			
Names: At3g24120.ampDAP, T16123;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: ragAAkATTCbwwt
Weblogo: 
PSSM: P0      A      C      G      T
01    219    114    153    110      r
02    312     60    144     80      a
03    147     21    367     61      g
04    456     52     13     75      A
05    584      0      0     12      A
06      0      0    196    400      k
07    596      0      0      0      A
08      0      0      0    596      T
09      0      0     10    586      T
10      0    596      0      0      C
11      0    258    165    173      b
12    181    120     68    227      w
13    207    106     29    254      w
14    127     78    103    288      t
Binding TFs: T16123 (Myb-like DNA-binding domain, MYB-CC type transfactor, LHEQLE motif)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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