DNA Binding Motif
| Accessions: | MA1120.1 (JASPAR 2024) |
| Names: | SOX13 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | raACAATGgmw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1539 663 1395 955 r 02 1795 958 1049 750 a 03 4451 22 40 39 A 04 55 4276 60 161 C 05 4329 55 50 118 A 06 4390 48 63 51 A 07 156 77 28 4291 T 08 585 57 3837 73 G 09 778 647 2666 461 g 10 1228 1257 1074 993 m 11 1228 1126 1046 1152 w |
| Type: | Heterodimer |
| Binding TFs: | Q9UN79 (HMG (high mobility group) box, Domain of unknown function (DUF1898)) Q9UN79 |
| Binding Sites: | MA1120.1.1 MA1120.1.10 MA1120.1.11 MA1120.1.12 MA1120.1.13 MA1120.1.14 MA1120.1.15 MA1120.1.16 MA1120.1.17 MA1120.1.18 MA1120.1.19 MA1120.1.2 MA1120.1.20 MA1120.1.3 MA1120.1.4 MA1120.1.5 MA1120.1.6 MA1120.1.7 MA1120.1.8 MA1120.1.9 |
| Publications: | Hou L, Srivastava Y, Jauch R. Molecular basis for the genome engagement by Sox proteins. Semin Cell Dev Biol : (2017). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.