DNA Binding Motif

						

			
Accessions: SCRT1_methyl_1 (HT-SELEX2 May2017)

			
Names: SCRT1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: wGCrACAGGTg
Weblogo: 
PSSM: P0      A      C      G      T
01  23786  14517  14270  25154      w
02   4273   4171  77727  20793      G
03    164  77727    233   2073      C
04  49721   3255  28007   3719      r
05  77727     11   1675   1243      A
06      0  77727      0      0      C
07  77727     42    118   1015      A
08  18186    531  77727   1082      G
09    656     23  77727   1154      G
10    174   2009     94  77727      T
11  15894   5895  41064  14875      g
Binding TFs: SCRT1 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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