DNA Binding Motif
| Accessions: | GCM1_ONECUT2_1 (HumanTF2 1.0) |
| Names: | GCM1_ONECUT2 |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF2 1.0 1 1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
| Notes: | Site type: heterodimeric; Experiment type: CAP-SELEX |
| Length: | 16 |
| Consensus: | rTGcGGGwAATCGATr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1403 358 635 119 r 02 137 253 205 2038 T 03 485 53 2038 26 G 04 317 2038 296 726 c 05 85 58 2038 49 G 06 4 0 2038 6 G 07 0 0 2038 35 G 08 810 361 218 649 w 09 1658 22 265 93 A 10 2038 16 122 81 A 11 31 66 35 2038 T 12 7 2038 0 53 C 13 530 110 2038 83 G 14 2038 24 83 107 A 15 23 24 52 2038 T 16 1262 428 777 479 r |
| Type: | Heterodimer |
| Binding TFs: | GCM1_TF1 (GCM motif protein) ONECUT2_TF2 (Homeobox domain, CUT domain) ONECUT2_Full (Homeobox domain, CUT domain) |
| Publications: | Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
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