DNA Binding Motif

						

			
Accessions: MA1639.2 (JASPAR 2024)

			
Names: MEIS1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 9
Consensus: cATmAATCA
Weblogo: 
PSSM: P0      A      C      G      T
01    970   4571    183   1012      c
02   6383     61    218     74      A
03     80     69     83   6504      T
04   2295   3580    252    609      m
05   6063    336     33    304      A
06   6112    214    192    218      A
07    127     87     63   6459      T
08    156   6367     61    152      C
09   5433    279    152    872      A
Type: Heterodimer
Binding TFs: O00470 (Homeobox domain, Homeobox KN domain)
O00470
Binding Sites: MA1639.2.6
MA1639.2.13 / MA1639.2.17 / MA1639.2.9
MA1639.2.8
MA1639.2.1
MA1639.2.10
MA1639.2.11 / MA1639.2.12 / MA1639.2.20
MA1639.2.14
MA1639.2.15 / MA1639.2.2
MA1639.2.16
MA1639.2.18 / MA1639.2.19
MA1639.2.3
MA1639.2.4
MA1639.2.5
MA1639.2.7
			
Publications: Penkov D, Mateos San Martín D, Fernandez-Díaz LC, Rosselló CA, Torroja C, Sánchez-Cabo F, Warnatz HJ, Sultan M, Yaspo ML, Gabrieli A, Tkachuk V, Brendolan A, Blasi F, Torres M. Analysis of the DNA-binding profile and function of TALE homeoproteins reveals their specialization and specific interactions with Hox genes/proteins. Cell Rep 3:1321-33 (2013). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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