DNA Binding Motif
| Accessions: | MA1836.1 (JASPAR 2024) |
| Names: | dsx |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 11 |
| Consensus: | hwACAATGTad |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1836 1527 802 1651 h 02 1566 920 1085 2245 w 03 5460 97 26 233 A 04 0 5444 124 248 C 05 5236 120 151 309 A 06 4573 247 249 747 A 07 736 151 121 4808 T 08 330 103 5383 0 G 09 233 22 137 5424 T 10 2306 1071 999 1440 a 11 1682 790 1520 1824 d |
| Type: | Heterodimer |
| Binding TFs: | P23023 (DM DNA binding domain, Doublesex dimerisation domain) P23023 |
| Binding Sites: | MA1836.1.1 MA1836.1.10 MA1836.1.11 MA1836.1.12 / MA1836.1.13 MA1836.1.13 / MA1836.1.15 MA1836.1.14 / MA1836.1.16 MA1836.1.15 / MA1836.1.18 MA1836.1.16 / MA1836.1.19 MA1836.1.17 / MA1836.1.20 MA1836.1.18 MA1836.1.19 MA1836.1.1 / MA1836.1.2 MA1836.1.20 MA1836.1.2 / MA1836.1.3 MA1836.1.3 / MA1836.1.4 MA1836.1.5 MA1836.1.6 MA1836.1.7 MA1836.1.8 MA1836.1.9 MA1836.1.12 MA1836.1.14 MA1836.1.17 MA1836.1.4 MA1836.1.8 |
| Publications: | Bergman C.M, Carlson J.W, Celniker S.E. Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster. Bioinformatics (Oxford, England) 21:1747-9 (2005). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.