DNA Binding Motif

						

			
Accessions: GSX2_methyl_1 (HT-SELEX2 May2017)

			
Names: GSX2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: vTCrTTAr
Weblogo: 
PSSM: P0      A      C      G      T
01   2894   3742   3044    549      v
02   1170    280    733   6786      T
03    702   6786      0    777      C
04   5717     32   6786     44      r
05      0     45      0   6786      T
06    288    293     76   6786      T
07   6786      0    161    625      A
08   2373    848   1930   1635      r
Binding TFs: GSX2 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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