DNA Binding Motif
| Accessions: | UP00480A_2 (UniPROBE 20160601) |
| Names: | GST-NOTCH1_Fig4, hN1, Neurogenic locus notch homolog protein 1, notch 1, TAN1, Translocation-associated notch protein TAN-1 |
| Organisms: | Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 14 |
| Consensus: | ytaawamaAsgArm |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.18 0.28 0.23 0.31 y 02 0.24 0.20 0.20 0.36 t 03 0.64 0.06 0.16 0.14 a 04 0.63 0.08 0.20 0.09 a 05 0.25 0.18 0.09 0.48 w 06 0.61 0.13 0.13 0.13 a 07 0.53 0.27 0.07 0.13 m 08 0.58 0.05 0.13 0.23 a 09 0.74 0.11 0.04 0.11 A 10 0.14 0.39 0.41 0.06 s 11 0.06 0.22 0.50 0.22 g 12 0.74 0.03 0.11 0.12 A 13 0.46 0.08 0.28 0.18 r 14 0.38 0.28 0.15 0.19 m |
| Binding TFs: | UP00480A (Ankyrin repeat, Ankyrin repeats (3 copies), Ankyrin repeat, Ankyrin repeats (many copies), Ankyrin repeats (many copies)) |
| Binding Sites: | AGGGGGGA ATTAATTC ATTTTTTA CGGAAGAA TTATAAAA AAAAAGGG AAGTAAAA AAGTGAAT ACAGATAA AGAAAGGG ATGGGAAA CCCCCTCC CCGAGTGA CGATATCG CTGGGAAC CTTTCTCA CTTTTCCC GAGAAACA GTTTCCCA TATTGAAA |
| Publications: | Del Bianco C, Vedenko A, Choi SH, Berger MF, Shokri L, Bulyk ML, Blacklow SC. Notch and MAML-1 complexation do not detectably alter the DNA binding specificity of the transcription factor CSL. PLoS One : (2010). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.