DNA Binding Motif

						

			
Accessions: HOXB2_ELF1_1 (HumanTF2 1.0)

			
Names: HOXB2_ELF1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: smGGAAGTmrTta
Weblogo: 
PSSM: P0      A      C      G      T
01    145    437    365     44      s
02    242    560     60     19      m
03      0      0    802      8      G
04     12     71    802     44      G
05    802     21     62     48      A
06    802      7     10     79      A
07     28     24    802      0      G
08     71     93     52    802      T
09    396    406    174     93      m
10    492    128    310     35      r
11     59     62    147    802      T
12    156    344    108    802      t
13    802     99    202    132      a
Type: Heterodimer
Binding TFs: ELF1_TF2 (Ets-domain, Transcription factor protein N terminal)
HOXB2_TF1 (Homeobox domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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