DNA Binding Motif

						

			
Accessions: 2jp9_A (3D-footprint 20231221)

			
Names: Wilms tumor 1
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of the Wilms Tumor Suppressor Protein Zinc Finger Domain Bound to DNA
Length: 14
Consensus: GCGGGGGCGTnTgC
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0     96      0      G
02      0     96      0      0      C
03      0      0     96      0      G
04      0      0     96      0      G
05      0      0     96      0      G
06      0      0     96      0      G
07      0      0     96      0      G
08      0     96      0      0      C
09      0      0     96      0      G
10      0      0      0     96      T
11     24     24     24     24      n
12     10     10     10     66      T
13     12     10     64     10      g
14     10     74      2     10      C
Binding TFs: 2jp9_A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Sites: 2jp9_B
2jp9_C
			
Publications: Stoll R, Lee B.M, Debler E.W, Laity J.H, Wilson I.A, Dyson H.J, Wright P.E. Structure of the Wilms tumor suppressor protein zinc finger domain bound to DNA. Journal of molecular biology 372:1227-45 (2007). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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