DNA Binding Motif
| Accessions: | MA1822.1 (JASPAR 2024) |
| Names: | Zm00001d018571 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 13 |
| Consensus: | yacGTACGTACry |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 144 229 142 199 y 02 235 164 171 144 a 03 116 336 118 144 c 04 69 59 563 23 G 05 10 50 24 630 T 06 675 15 16 8 A 07 13 637 19 45 C 08 58 25 613 18 G 09 8 17 14 675 T 10 630 19 54 11 A 11 23 580 51 60 C 12 180 144 261 129 r 13 148 180 163 223 y |
| Type: | Heterodimer |
| Binding TFs: | A0A1D6HQE4 (bZIP transcription factor, Basic region leucine zipper) A0A1D6HQE4 |
| Binding Sites: | MA1822.1.1 / MA1822.1.3 MA1822.1.10 MA1822.1.11 MA1822.1.12 MA1822.1.13 MA1822.1.14 MA1822.1.15 MA1822.1.16 MA1822.1.17 MA1822.1.18 MA1822.1.19 MA1822.1.2 / MA1822.1.4 MA1822.1.20 MA1822.1.3 / MA1822.1.5 MA1822.1.4 / MA1822.1.6 MA1822.1.11 / MA1822.1.5 MA1822.1.18 / MA1822.1.6 MA1822.1.19 / MA1822.1.7 MA1822.1.8 MA1822.1.9 MA1822.1.1 MA1822.1.10 MA1822.1.12 MA1822.1.13 / MA1822.1.14 MA1822.1.15 MA1822.1.16 MA1822.1.17 MA1822.1.2 MA1822.1.20 MA1822.1.7 MA1822.1.8 MA1822.1.9 |
| Publications: | Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.