DNA Binding Motif

						

			
Accessions: M0058 (AthalianaCistrome v4_May2016)

			
Names: At4g31060.ampDAP, T18078;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: rwwtTGTCGGTGrhk
Weblogo: 
PSSM: P0      A      C      G      T
01    197     91    155    146      r
02    188    125     85    191      w
03    182     70    110    227      w
04    122     97    123    247      t
05     31    118      2    438      T
06      0      0    589      0      G
07     59      0     47    483      T
08      0    589      0      0      C
09      0      0    589      0      G
10      0      0    589      0      G
11      0     82      0    507      T
12     40      5    522     22      G
13    227     68    228     66      r
14    198    149     61    181      h
15    140     65    217    167      k
Binding TFs: T18078 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.