DNA Binding Motif

Accessions: MA2147.1 (JASPAR 2024)
Names: nsy-7
Organisms: Caenorhabditis elegans
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 6
Consensus: TTAAGG
Weblogo:
PSSM: P0 A C G T
01 0 145 18 836 T
02 0 0 107 892 T
03 861 107 0 30 A
04 924 0 75 0 A
05 0 15 893 90 G
06 0 0 1000 0 G
Binding TFs: H2KYW5
Publications: Alqadah A, Hsieh YW, Xiong R, Lesch BJ, Chang C, Chuang CF. A universal transportin protein drives stochastic choice of olfactory neurons via specific nuclear import of a sox-2-activating factor. Proc Natl Acad Sci U S A 116:25137-25146 (2019). [Pubmed]

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