DNA Binding Motif

						

			
Accessions: SP1_HUMAN.H10MO.C|M01523 (HOCOMOCO 10), SP1_MOUSE.H10MO.A|M01351 (HOCOMOCO 10)

			
Names: SP1
Organisms: Homo sapiens, Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Three-zinc finger Krüppel-related factors{2.3.1}; Sp1-like factors{2.3.1.1}
Length: 19
Consensus: gggrrgGGGGcGGGGcsrg
Weblogo: 
PSSM: P0      A      C      G      T
01    532    554   1559    288      g
02    645    511   1380    397      g
03    482    412   1742    297      g
04    762    587   1304    280      r
05   1050    522    935    426      r
06    626    370   1709    228      g
07    316     64   2141    412      G
08    476     14   2425     18      G
09      9     14   2899     11      G
10     19     34   2877      3      G
11    536   1900     62    435      c
12     51     28   2757     97      G
13     44     44   2724    121      G
14    482    147   2184    120      G
15    249    207   2341    136      G
16    432   1610    561    330      c
17    279   1269    768    617      s
18    790    461   1089    593      r
19    607    660   1392    274      g
Type: Heterodimer
Binding TFs: SP1_HUMAN (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
SP1_MOUSE (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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