DNA Binding Motif
| Accessions: | M0783_1.02 (CISBP 1.02) |
| Names: | Gata3, T084792_1.02 |
| Organisms: | Mus musculus |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Length: | 10 |
| Consensus: | wwswGATaas |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.2686 0.2335 0.2266 0.2713 w 02 0.2742 0.2360 0.2290 0.2608 w 03 0.2287 0.2553 0.2683 0.2477 s 04 0.4241 0.2374 0.0654 0.2731 w 05 0.0739 0.0289 0.8732 0.0241 G 06 0.9417 0.0097 0.0017 0.0469 A 07 0.0628 0.0302 0.0362 0.8708 T 08 0.4868 0.1809 0.0954 0.2369 a 09 0.4539 0.1327 0.1902 0.2232 a 10 0.2273 0.2589 0.3162 0.1976 s |
| Binding TFs: | T084792_1.02 (GATA zinc finger) |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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