DNA Binding Motif
| Accessions: | MA1394.2 (JASPAR 2024) |
| Names: | MYB73 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 12 |
| Consensus: | whAACGGTcAww |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 298 222 192 354 w 02 274 268 46 478 h 03 1056 0 6 4 A 04 1024 36 1 5 A 05 5 1047 2 12 C 06 19 102 847 98 G 07 19 4 1026 17 G 08 16 27 4 1019 T 09 191 614 24 237 c 10 963 32 36 35 A 11 411 231 130 294 w 12 355 199 184 328 w |
| Type: | Heterodimer |
| Binding TFs: | O23160 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) O23160 |
| Binding Sites: | MA1394.2.1 MA1394.2.10 / MA1394.2.4 MA1394.2.11 MA1394.2.12 / MA1394.2.5 MA1394.2.13 / MA1394.2.6 MA1394.2.14 MA1394.2.15 MA1394.2.16 MA1394.2.17 MA1394.2.18 / MA1394.2.7 MA1394.2.19 / MA1394.2.8 MA1394.2.2 MA1394.2.20 / MA1394.2.9 MA1394.2.3 MA1394.2.4 MA1394.2.1 / MA1394.2.5 MA1394.2.2 / MA1394.2.6 MA1394.2.7 MA1394.2.8 MA1394.2.3 / MA1394.2.9 MA1394.2.10 MA1394.2.11 MA1394.2.12 MA1394.2.13 MA1394.2.14 MA1394.2.15 / MA1394.2.16 MA1394.2.17 MA1394.2.18 MA1394.2.19 MA1394.2.20 |
| Publications: | Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.