DNA Binding Motif

						

			
Accessions: 4tnt_AB (3D-footprint 20231221)

			
Names: Mineralocorticoid receptor
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of the human mineralocorticoid receptor in complex with DNA
Length: 13
Consensus: GnaCannnTGnnC
Weblogo: 
PSSM: P0      A      C      G      T
01     10      1     85      0      G
02     24     24     24     24      n
03     64     12     10     10      a
04      0     96      0      0      C
05     64     10     12     10      a
06     24     24     24     24      n
07     24     24     24     24      n
08     24     24     24     24      n
09      0     10      0     86      T
10      0      0     96      0      G
11     24     24     24     24      n
12     24     24     24     24      n
13      0     96      0      0      C
Binding TFs: 4tnt_A / 4tnt_B (Zinc finger, C4 type (two domains))
Binding Sites: 4tnt_D
4tnt_C
			
Publications: Hudson W.H, Youn C, Ortlund E.A. Crystal structure of the mineralocorticoid receptor DNA binding domain in complex with DNA. PloS one 9:e107000 (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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