DNA Binding Motif

						

			
Accessions: ZSCAN16_methyl_1 (HT-SELEX2 May2017)

			
Names: ZSCAN16
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 19
Consensus: rArTGTTAACAGAGCCTCt
Weblogo: 
PSSM: P0      A      C      G      T
01   3901   1245   2742    813      r
02   6473    285   1493    617      A
03   2387    286   3990   2037      r
04     11    296     72   8353      T
05      1      1   8699      1      G
06      1      1      0   8699      T
07      0      2      0   8699      T
08   8250      0    497     29      A
09   8615      1      4     84      A
10      0   8701      1      0      C
11   8576      5      3    188      A
12      2      1   8699      1      G
13   8699      1      2      1      A
14      1      0   8700      0      G
15      0   8700      0      0      C
16    523   8701      0      0      C
17      1    528      1   8698      T
18      0   8685      8      9      C
19   2148    700   1965   3888      t
Binding TFs: ZSCAN16 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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