DNA Binding Motif
| Accessions: | MA1700.1 (JASPAR 2024) |
| Names: | Clamp |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 14 |
| Consensus: | GwGmGAGCGAGAgr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 332 250 1888 181 G 02 1071 455 378 747 w 03 189 175 2178 109 G 04 713 1322 354 262 m 05 74 29 2532 16 G 06 2510 32 43 66 A 07 62 11 2562 16 G 08 325 1998 174 154 C 09 31 12 2600 8 G 10 2451 28 155 17 A 11 71 36 2517 27 G 12 2038 332 118 163 A 13 234 502 1515 400 g 14 1251 327 960 113 r |
| Type: | Heterodimer |
| Binding TFs: | Q8IGP5 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) Q8IGP5 |
| Binding Sites: | MA1700.1.1 MA1700.1.10 MA1700.1.11 MA1700.1.12 MA1700.1.13 MA1700.1.14 MA1700.1.15 MA1700.1.16 / MA1700.1.6 MA1700.1.17 MA1700.1.18 MA1700.1.19 MA1700.1.2 MA1700.1.20 MA1700.1.3 MA1700.1.4 MA1700.1.5 MA1700.1.7 MA1700.1.8 MA1700.1.9 |
| Publications: | Soruco MM, Chery J, Bishop EP, Siggers T, Tolstorukov MY, Leydon AR, Sugden AU, Goebel K, Feng J, Xia P, Vedenko A, Bulyk ML, Park PJ, Larschan E. The CLAMP protein links the MSL complex to the X chromosome during Drosophila dosage compensation. Genes Dev 27:1551-6 (2013). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.