DNA Binding Motif
| Accessions: | MA2157.1 (JASPAR 2024) |
| Names: | atfs-1 |
| Organisms: | Caenorhabditis elegans |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 10 |
| Consensus: | ATGATGCAAw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 288 30 42 16 A 02 7 11 7 351 T 03 23 14 321 18 G 04 343 4 14 15 A 05 10 39 10 317 T 06 16 7 345 8 G 07 31 326 7 12 C 08 349 18 5 4 A 09 339 14 11 12 A 10 202 44 28 102 w |
| Binding TFs: | Q23272 |
| Binding Sites: | MA2157.1.4 MA2157.1.7 MA2157.1.6 MA2157.1.1 MA2157.1.10 MA2157.1.11 MA2157.1.12 MA2157.1.13 MA2157.1.14 MA2157.1.15 MA2157.1.16 / MA2157.1.17 MA2157.1.18 MA2157.1.19 MA2157.1.2 MA2157.1.20 / MA2157.1.3 MA2157.1.5 MA2157.1.8 MA2157.1.9 |
| Publications: | Nargund AM, Fiorese CJ, Pellegrino MW, Deng P, Haynes CM. Mitochondrial and nuclear accumulation of the transcription factor ATFS-1 promotes OXPHOS recovery during the UPR(mt). Mol Cell 58:123-33 (2015). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.