DNA Binding Motif

						

			
Accessions: HOXA10_4 (HT-SELEX2 May2017)

			
Names: HOXA10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: gGymATAAAAm
Weblogo: 
PSSM: P0      A      C      G      T
01   1612    812   4996    842      g
02    507    124   8263     71      G
03      0   3215      9   5047      y
04   8263   3897    120    109      m
05   8263      0     61      0      A
06    120      0      0   8263      T
07   8263      0      0   1001      A
08   8263      0      0      0      A
09   8263      7      0      0      A
10   8263    620    391    439      A
11   2457   2706   1207   1893      m
Binding TFs: HOXA10 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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