DNA Binding Motif
| Accessions: | ZFP42_methyl_1 (HT-SELEX2 May2017) |
| Names: | ZFP42 |
| Organisms: | Homo sapiens |
| Libraries: | HT-SELEX2 May2017 1 1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed] |
| Length: | 15 |
| Consensus: | tGGCrGCCATmTTGk |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 7316 6649 7616 14819 t 02 2688 230 34135 487 G 03 6542 33 26333 4694 G 04 407 34425 1025 1527 C 05 15021 553 21182 38 r 06 30 0 36387 51 G 07 2493 34652 22 2 C 08 5 36402 8 4 C 09 36397 0 9 0 A 10 0 36 0 36392 T 11 20028 15378 703 905 m 12 0 68 65 36399 T 13 0 64 4 36380 T 14 942 177 30823 7093 G 15 6952 6203 13617 9628 k |
| Binding TFs: | ZFP42 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) |
| Publications: | Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.