DNA Binding Motif

						

			
Accessions: TBX21_DBD_1 (HumanTF 1.0)

			
Names: TBX21
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 16
Consensus: gGTGTGAwwTcACACc
Weblogo: 
PSSM: P0      A      C      G      T
01   2552   1729  11405   1649      g
02    175    423  13641    385      G
03     67   1387    125  13164      T
04     69     34  13932     39      G
05   1547   2507    168  12163      T
06   1092    855  12482   2687      G
07   9191     28    240    103      A
08   4025   2070    837   3535      w
09   3533   1224   1916   4604      w
10    260    219    100  13524      T
11   2594   7499   1365    760      c
12   8618    145   2123   1063      A
13     14   8478     41     40      C
14   8991     63   1184     52      A
15    240   8477    313     72      C
16   1067   7761   1333   2231      c
Binding TFs: TBX21_DBD (T-box)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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