DNA Binding Motif

						

			
Accessions: M0192 (AthalianaCistrome v4_May2016)

			
Names: GBF3.ampDAP, T08054;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: dwwkvhsACGTGKCa
Weblogo: 
PSSM: P0      A      C      G      T
01    171     49    154    162      d
02    158    122    122    134      w
03    179     81     59    217      w
04     79     64    254    139      k
05    134    142    152    108      v
06    169    134      7    226      h
07      6    268    212     50      s
08    535      0      1      0      A
09      0    501     16     19      C
10     14     10    505      7      G
11      0      0      1    535      T
12      0      0    536      0      G
13      0      4    390    142      K
14    127    386      2     21      C
15    267     53    120     96      a
Binding TFs: T08054 (bZIP transcription factor, Basic region leucine zipper, G-box binding protein MFMR)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.