DNA Binding Motif

						

			
Accessions: M0616 (AthalianaCistrome v4_May2016)

			
Names: At5g47390.ampDAP, T21722;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: wwwTGGATAAgrww
Weblogo: 
PSSM: P0      A      C      G      T
01    280     18     59    225      w
02    265      6     12    299      w
03    215     29    123    215      w
04     65     49      0    468      T
05     67      1    513      1      G
06      0      0    582      0      G
07    582      0      0      0      A
08      0      0      0    582      T
09    567      8      4      3      A
10    530      1     18     33      A
11    107     67    266    142      g
12    206     64    229     83      r
13    176     71     33    302      w
14    170     47     61    304      w
Binding TFs: T21722 (Myb-like DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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