DNA Binding Motif

						

			
Accessions: ONECUT1_DBD (HumanTF 1.0)

			
Names: ONECUT1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 14
Consensus: aaaAAATCrATAww
Weblogo: 
PSSM: P0      A      C      G      T
01   3403   1375   1936   1194      a
02   4130    713   1874   1191      a
03   7908    824   1288   1872      a
04   7908    468    275   2265      A
05   7908     24    392     27      A
06   7908     10     24     15      A
07     12     10      7   7908      T
08     18   7908      9      3      C
09   3718     13   4190      2      r
10   7908      7      2     26      A
11      7      4      0   7908      T
12   7908    187    358    811      A
13   5211   1858    819   2697      w
14   2667   1532    901   2808      w
Binding TFs: ONECUT1_DBD (Homeobox domain, CUT domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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