DNA Binding Motif

						

			
Accessions: Barhl1_DBD_3 (HumanTF 1.0)

			
Names: Barhl1
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 16
Consensus: TAAwyGsysyTAAwyG
Weblogo: 
PSSM: P0      A      C      G      T
01    189     26      1   4146      T
02   4146      9     32    325      A
03   4146      3     32      7      A
04   1996     76    475   2150      w
05    451   1754    403   2392      y
06    721     83   4146    325      G
07    639   1316   1264    927      s
08    421   1374    495   1855      y
09    737   1316   1533    560      s
10    764   1519    542   1320      y
11    183     28      2   4146      T
12   4146      0     29    434      A
13   4146      0      5      5      A
14   2151     60    495   1995      w
15    336   1897    389   2249      y
16    847    102   4146    382      G
Binding TFs: Barhl1_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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