DNA Binding Motif
| Accessions: | MA0161.3 (JASPAR 2024) |
| Names: | NFIC |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 7 |
| Consensus: | CTTGGCA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 412 10542 329 324 C 02 154 303 369 10781 T 03 352 333 177 10745 T 04 310 129 11087 81 G 05 223 121 10973 290 G 06 264 10725 88 530 C 07 10158 397 478 574 A |
| Type: | Heterodimer |
| Binding TFs: | P08651 (CTF/NF-I family transcription modulation region, MH1 domain, Nuclear factor I protein pre-N-terminus) P08651 |
| Binding Sites: | MA0161.3.1 / MA0161.3.10 / MA0161.3.11 / MA0161.3.16 / MA0161.3.17 / MA0161.3.18 / MA0161.3.19 / MA0161.3.20 / MA0161.3.5 / MA0161.3.8 MA0161.3.12 / MA0161.3.15 / MA0161.3.9 MA0161.3.13 MA0161.3.14 MA0161.3.2 MA0161.3.3 MA0161.3.4 MA0161.3.6 MA0161.3.7 |
| Publications: | Roulet E, Busso S, Camargo A.A, Simpson A.J, Mermod N, Bucher P. High-throughput SELEX SAGE method for quantitative modeling of transcription-factor binding sites. Nature biotechnology 20:831-5 (2002). [Pubmed] |
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