DNA Binding Motif

						

			
Accessions: HOXA10_methyl_2 (HT-SELEX2 May2017)

			
Names: HOXA10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: gGymATAAAAc
Weblogo: 
PSSM: P0      A      C      G      T
01    584    503   1356    332      g
02    224    203   2774    154      G
03      0   1115      3   1659      y
04   2774   1330     20     73      m
05   2774      0     15      0      A
06    156      0      0   2774      T
07   2774      6     29    533      A
08   2774      0      2     30      A
09   2774     18      0      0      A
10   2774    400    199    399      A
11    674   1028    387    685      c
Binding TFs: HOXA10 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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