DNA Binding Motif

						

			
Accessions: HINFP1_full_2 (HumanTF 1.0)

			
Names: HINFP1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 20
Consensus: GCGGACGyysCArCGTCCGC
Weblogo: 
PSSM: P0      A      C      G      T
01     54      2   2995     22      G
02      0   2068      0      0      C
03      0      0   2000      0      G
04      0      0   2601      8      G
05   1875      1      0      5      A
06      0   1968      2      0      C
07      0    293   2261     11      G
08     13    723    321   1361      y
09    179    804    296   1162      y
10    231    620   1502     23      s
11     21   1524    109    525      C
12   1389     28    425     75      A
13   1069    324    595     14      r
14      0   1657    318      0      C
15      0      0   2116      2      G
16      8      1      5   2272      T
17      0   1703      0      0      C
18      2   1798      0      0      C
19      0      4   2032      2      G
20      3   1789     13     17      C
Binding TFs: HINFP1_full (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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