DNA Binding Motif

						

			
Accessions: RFX3_4 (HT-SELEX2 May2017)

			
Names: RFX3
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 15
Consensus: sGTTGCyTAGCAACs
Weblogo: 
PSSM: P0      A      C      G      T
01    108   1597    717    336      s
02      0      0   2758      0      G
03      2      4      2   2758      T
04     17     90      4   2758      T
05    127      2   2758     24      G
06      0   2758      0      3      C
07     27   2758    120   1557      y
08    143     10      9   2615      T
09   2758     18    144      7      A
10      1      0   2758      0      G
11      2   2758      4     42      C
12   2758      0     78     11      A
13   2758      1     16      3      A
14      0   2758      4      6      C
15    437    948   1230    143      s
Binding TFs: RFX3 (RFX DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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