DNA Binding Motif

						

			
Accessions: ISX_DBD_1 (HumanTF 1.0)

			
Names: ISX
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 13
Consensus: yTAATyTAATTAr
Weblogo: 
PSSM: P0      A      C      G      T
01    687   1148    735   1752      y
02    131     65     61   4323      T
03   4323     38    136    296      A
04   4323    121    170     32      A
05    351    557    376   4323      T
06     28   2948    275   1375      y
07     22    684    317   4323      T
08   4323     19     23     10      A
09   4323     16      7      2      A
10      0     16      2   4323      T
11     10      4     11   4323      T
12   4323      6     77     86      A
13   1653    739   1269    662      r
Binding TFs: ISX_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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