DNA Binding Motif

						

			
Accessions: VSX2_methyl_1 (HT-SELEX2 May2017)

			
Names: VSX2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: CyAATTRs
Weblogo: 
PSSM: P0      A      C      G      T
01    261   7351    677   2217      C
02    171   5086    140   9568      y
03   9568    710     52      0      A
04   9568      0     52      0      A
05      0      0      0   9568      T
06      0    417    610   9568      T
07   9568      0   3953    119      R
08   1101   3621   3009   1837      s
Binding TFs: VSX2 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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