DNA Binding Motif

						

			
Accessions: MAFA_methyl_1 (HT-SELEX2 May2017)

			
Names: MAFA
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 13
Consensus: rawwrYGCTGACd
Weblogo: 
PSSM: P0      A      C      G      T
01   7635   4051   5335   3801      r
02  14380   1849   5427   6443      a
03  11434    830   1280   9388      w
04  10334   2685   1485  10489      w
05   5248   4627   5966   4981      r
06    867   8555    150  20822      Y
07     10      8  20822      7      G
08   1119  20822      0      0      C
09      0    616      0  20822      T
10    112     18  20822    996      G
11  20822     24     42      0      A
12    432  20822   2338   3829      C
13   6025   2385   6090   6323      d
Binding TFs: MAFA (bZIP Maf transcription factor)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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