DNA Binding Motif

						

			
Accessions: ZSCAN4_2 (HT-SELEX2 May2017)

			
Names: ZSCAN4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 17
Consensus: syGCACACvCTGamAah
Weblogo: 
PSSM: P0      A      C      G      T
01   4544   5182   5728   2903      s
02   3367   6634   2232   9788      y
03   4899     83  16709     13      G
04     23  18345      0     43      C
05  18349      0      7     13      A
06      5  18348     12     21      C
07  18350     42     41     14      A
08    176  17815    128   1367      C
09   5621   6203   6191    343      v
10    257  18271     56     52      C
11    535    379   1503  17841      T
12    400   1431  17219   2671      G
13  11226   5183   3986   5352      a
14  14972  12045    222    656      m
15  18312     79    186     69      A
16  10949   4732   4743   3062      a
17   4972   4801   2668   5916      h
Binding TFs: ZSCAN4 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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