DNA Binding Motif

						

			
Accessions: Spic_DBD (HumanTF 1.0)

			
Names: Spic
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 14
Consensus: aAAAAGmGGAAGTa
Weblogo: 
PSSM: P0      A      C      G      T
01    264     46     78     22      a
02    243     10     40     20      A
03    295      2      0     24      A
04    301      0      2     11      A
05    265      1     28     64      A
06      2     63    277      5      G
07    157    169     49      0      m
08      2      0    273      0      G
09      0      0    273      0      G
10    298      0      3      0      A
11    298      0      0      2      A
12      2     12    269      0      G
13      2      0      3    267      T
14    191     22     42     78      a
Binding TFs: Spic_DBD (Ets-domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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