DNA Binding Motif

						

			
Accessions: IRF7_methyl_1 (HT-SELEX2 May2017)

			
Names: IRF7
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 15
Consensus: wgGAAArTGAAAgtr
Weblogo: 
PSSM: P0      A      C      G      T
01    445    271    220    350      w
02    298    262    406    319      g
03    125     59   1285     64      G
04   1285      8     24      0      A
05   1285      2     11     12      A
06   1285      7      3     88      A
07    328    105    834     18      r
08     76    212     74   1073      T
09     22      5   1285      2      G
10   1285     28     36     15      A
11   1285      0      6      5      A
12   1285     24      1     66      A
13    298    258    633     97      g
14    161    295     65    990      t
15    480    114    525    166      r
Binding TFs: IRF7 (Interferon regulatory factor transcription factor)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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