DNA Binding Motif

						

			
Accessions: M0362 (AthalianaCistrome v4_May2016)

			
Names: E2FA.ampDAP, T10814;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: tttTGGCGCCwwww
Weblogo: 
PSSM: P0      A      C      G      T
01    126     89     31    346      t
02    104     55     32    401      t
03    112     16     77    387      t
04     13      0      9    570      T
05      3      0    589      0      G
06      0      0    592      0      G
07      0    592      0      0      C
08      0      0    592      0      G
09      0    534     58      0      C
10      0    426    127     39      C
11    325     98     19    150      w
12    232     79     33    248      w
13    223     83     50    236      w
14    214     82     66    230      w
Binding TFs: T10814 (E2F/DP family winged-helix DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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