DNA Binding Motif

						

			
Accessions: HLF_2 (HT-SELEX2 May2017)

			
Names: HLF
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: cgTTRYGYAAyr
Weblogo: 
PSSM: P0      A      C      G      T
01   1262   2635   1817   1840      c
02   2525   1781   5029    819      g
03    306    356    438   7554      T
04    321    365   1454   7554      T
05   5643     89   1912      0      R
06      0   5193     52   2362      Y
07      0      0   7554      0      G
08      0   2139     66   5416      Y
09   7554   1315    489    427      A
10   7554    467    283    674      A
11    811   4923   1832   2631      y
12   1950   1698   2616   1290      r
Binding TFs: HLF (Basic region leucine zipper)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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