DNA Binding Motif
| Accessions: | MA1660.1 (JASPAR 2024) |
| Names: | ANAC13, NAC013 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 24 |
| Consensus: | wdtTTaCTTGttctcCAAGtAAhh |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 398 261 175 362 w 02 303 217 306 370 d 03 223 130 229 614 t 04 101 22 24 1049 T 05 195 29 128 844 T 06 631 144 182 239 a 07 16 1172 0 8 C 08 2 9 81 1104 T 09 1 2 0 1193 T 10 41 131 964 60 G 11 134 180 101 781 t 12 164 164 224 644 t 13 207 558 198 233 c 14 240 293 138 525 t 15 295 529 197 175 c 16 23 1125 28 20 C 17 1195 0 0 1 A 18 1094 98 1 3 A 19 9 0 1181 6 G 20 250 148 120 678 t 21 875 108 15 198 A 22 1016 19 16 145 A 23 380 309 164 343 h 24 338 352 177 329 h |
| Type: | Heterodimer |
| Binding TFs: | F4IED2 (No apical meristem (NAM) protein) F4IED2 |
| Binding Sites: | MA1660.1.1 MA1660.1.10 MA1660.1.11 MA1660.1.12 / MA1660.1.3 MA1660.1.13 MA1660.1.14 MA1660.1.15 MA1660.1.16 MA1660.1.17 MA1660.1.18 MA1660.1.19 MA1660.1.2 MA1660.1.20 MA1660.1.1 / MA1660.1.3 MA1660.1.2 / MA1660.1.4 MA1660.1.5 MA1660.1.6 MA1660.1.7 MA1660.1.8 MA1660.1.9 MA1660.1.7 MA1660.1.8 MA1660.1.4 MA1660.1.10 MA1660.1.11 MA1660.1.12 MA1660.1.13 MA1660.1.14 MA1660.1.15 MA1660.1.16 MA1660.1.17 MA1660.1.18 MA1660.1.19 MA1660.1.20 MA1660.1.5 MA1660.1.6 MA1660.1.9 |
| Publications: | De Clercq I, Vermeirssen V, Van Aken O, Vandepoele K, Murcha MW, Law SR, Inzé A, Ng S, Ivanova A, Rombaut D, van de Cotte B, Jaspers P, Van de Peer Y, Kangasjärvi J, Whelan J, Van Breusegem F. The membrane-bound NAC transcription factor ANAC013 functions in mitochondrial retrograde regulation of the oxidative stress response in Arabidopsis. Plant Cell 25:3472-90 (2013). [Pubmed] |
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