DNA Binding Motif
| Accessions: | MA1270.2 (JASPAR 2024) |
| Names: | DOF3.2 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 16 |
| Consensus: | ywaCTTTTTsyytttt |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 75 151 51 323 y 02 177 111 27 285 w 03 319 138 85 58 a 04 0 600 0 0 C 05 0 0 0 600 T 06 0 0 1 599 T 07 0 0 0 600 T 08 135 0 0 465 T 09 39 55 10 496 T 10 129 175 176 120 s 11 129 211 107 153 y 12 87 189 57 267 y 13 83 98 56 363 t 14 89 55 59 397 t 15 104 120 48 328 t 16 126 92 55 327 t |
| Type: | Heterodimer |
| Binding TFs: | Q9M1E6 (Dof domain, zinc finger) Q9M1E6 |
| Binding Sites: | MA1270.2.1 MA1270.2.10 MA1270.2.11 MA1270.2.12 MA1270.2.13 MA1270.2.14 MA1270.2.15 MA1270.2.16 MA1270.2.17 MA1270.2.18 MA1270.2.19 MA1270.2.2 MA1270.2.20 MA1270.2.3 MA1270.2.4 MA1270.2.5 MA1270.2.6 MA1270.2.7 MA1270.2.8 MA1270.2.9 |
| Publications: | Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.