DNA Binding Motif

						

			
Accessions: UN0554.2 (JASPAR 2024)

			
Names: GCM2::PITX1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 12
Consensus: TrcGGGsGATTA
Weblogo: 
PSSM: P0      A      C      G      T
01    766    996    646   6672      T
02   2033    719   4639     18      r
03   3425   6672   1641   2618      c
04   1538     17   6672    740      G
05      0      0   6672      0      G
06      7     12   6672     23      G
07    588   3401   3271    766      s
08     53     74   6672    250      G
09   6672   1562    149    128      A
10      0    146     44   6672      T
11    670    585    133   6672      T
12   6672    205    523   1556      A
Type: Heterodimer
Binding TFs: P78337 (Homeobox domain, OAR domain)
P78337
			
	
			


			

				

				
				
				
				

			

			

		

	
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