DNA Binding Motif

						

			
Accessions: FERD3L_methyl_2 (HT-SELEX2 May2017)

			
Names: FERD3L
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: GyrmCAtaTGkyAC
Weblogo: 
PSSM: P0      A      C      G      T
01    192      0  12183      0      G
02     29   8170      0   4013      y
03   7112    500   4584      0      r
04   4779   6318    962    123      m
05      0  12183      0      0      C
06  12183      0      7      0      A
07      0   2486   3469  12183      t
08  12183   3906   2401      0      a
09      0      1      3  12183      T
10      0      0  12183      0      G
11     98   1221   3707   7156      k
12      0   3352   1421   7428      y
13  12183      0   3160    117      A
14      0  12183      0      0      C
Binding TFs: FERD3L (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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