DNA Binding Motif

						

			
Accessions: SREBF2_4 (HT-SELEX2 May2017)

			
Names: SREBF2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: aTCACGCCAy
Weblogo: 
PSSM: P0      A      C      G      T
01   2281    372    784     24      a
02     57    186     12   2281      T
03     11   2281     44      0      C
04   2281      0     55     11      A
05      6   2281     35     63      C
06    487    446   2281     43      G
07     30   2281     10     50      C
08      0   2281    444     81      C
09   2281      2     10      6      A
10      1   1525     29    756      y
Binding TFs: SREBF2 (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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